Why MDS Can Be Misdiagnosed: Hidden Links to Pernicious Anemia
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Introduction
Vitamin B12 deficiency is a growing concern, especially among older adults. In the U.S. and UK, it affects roughly 20% of individuals over age 60, with over 26.5 million Americans impacted. A key contributor is pernicious anemia, which affects about 151 per 100,000 people in the U.S. This condition can closely mimic myelodysplastic syndrome (MDS), creating a significant diagnostic challenge due to overlapping clinical and laboratory features.
Diagnosing pernicious anemia can be challenging, as patients often present with cytopenias that mirror MDS symptoms. This overlap becomes more complex when considering that anti-intrinsic factor antibodies can interfere with automated assays, consequently leading to misleading vitamin B12 levels that appear normal or elevated. The implications of misdiagnosis are serious, as untreated pernicious anemia can cause irreversible neurological damage.
Vitamin B12 plays a critical role in maintaining the integrity of the nervous system. When deficiency is left untreated—particularly in cases of pernicious anemia—patients may develop progressive demyelination, affecting both the central and peripheral nervous systems. This can result in:
- Peripheral neuropathy (numbness, tingling, or burning in the hands and feet)
- Loss of coordination or balance (ataxia)
- Gait disturbances
- Visual disturbances due to optic nerve damage
These changes may become permanent if B12 supplementation is delayed.
Cognitive Impairment: Confusion and Memory Loss
Vitamin B12 deficiency is associated with neuropsychiatric manifestations, particularly in older adults. These may present subtly as forgetfulness, confusion, or difficulty concentrating and can be easily mistaken for early dementia or age-related cognitive decline.
Without timely correction, these symptoms may progress to more severe forms of cognitive dysfunction, including:
- Short-term memory loss
- Impaired executive function
- Disorientation
Timely B12 therapy can reverse many of these symptoms, especially when initiated early.
Depression and Mood Disorders
There is growing evidence linking B12 deficiency to mood disorders, including depression and irritability. This is believed to be due to disrupted synthesis of neurotransmitters such as serotonin and dopamine.
In clinical practice, patients may present with:
- Affective flattening
- Apathy or social withdrawal
- Depressive episodes that do not respond well to typical antidepressants until B12 levels are corrected
Recognizing the role of B12 in mood regulation can prevent unnecessary psychiatric interventions and improve quality of life.
Progressive Hematologic Complications
If untreated, pernicious anemia can lead to severe hematologic manifestations, including:
- Pancytopenia – simultaneous reductions in red blood cells, white blood cells, and platelets
- Severe macrocytic anemia – with fatigue, pallor, and dyspnea on exertion
- Hemolysis – due to ineffective erythropoiesis and intramedullary destruction of red cell precursors
- Bone marrow suppression – mimicking features of marrow failure syndromes such as MDS
In advanced cases, the bone marrow may show marked dysplasia and cellular changes that are difficult to distinguish from hematologic malignancies, increasing the risk of misdiagnosis and inappropriate management.
The accurate diagnosis of pernicious anemia requires careful evaluation of megaloblastic hemopoiesis, vitamin B12 deficiency, and gastric intrinsic factor levels – parameters that demand precise clinical assessment to differentiate from true MDS.
Diagnostic Challenges: When MDS and Pernicious Anemia Overlap
Distinguishing between myelodysplastic syndrome (MDS) and vitamin B12 deficiency presents a formidable challenge for clinicians. Both conditions share overlapping features that can lead to diagnostic confusion, especially in elderly patients who typically present with similar clinical manifestations.
Cytopenia Patterns in Both Conditions
Pancytopenia serves as a common hematological finding in both MDS and severe B12 deficiency. Notably, B12 deficiency can lead to bone marrow failure and dysplasia, resulting in severe pancytopenia without the typical neurological manifestations associated with this condition. Furthermore, in both conditions, the median age of presentation is similar—approximately 70 years—with patients often presenting with insidious onset fatigue and dyspnea. This age-related overlap further complicates initial clinical assessment and may delay proper diagnosis.
Dysplastic Features That Appear Similar
The morphological similarities between these conditions represent a major diagnostic challenge:
- B12 deficiency causes stunted hematopoiesis leading to the production of large, abnormally nucleated red blood cells that mimic the dysplastic cells seen in MDS
- In severe cases of pernicious anemia, packed dysmorphic erythroblasts may resemble certain leukemias, such as erythroleukemia
- Peripheral blood smear findings in both conditions may include hypersegmented neutrophils, tear drop cells, and dysplastic white blood cells
Laboratory Test Limitations in Differential Diagnosis
Serum B12 levels alone are unreliable. Up to 50% of patients with subclinical B12 deficiency may have falsely normal results, particularly when anti-intrinsic factor antibodies interfere with automated assays.
To improve diagnostic accuracy, clinicians should assess:
- Methylmalonic acid (MMA)
- Homocysteine levels
Elevated levels of both are 99.8% sensitive for functional B12 deficiency, even when serum B12 appears within range.
How Often is MDS Misdiagnosed Due to B12 Deficiency?
Although precise rates are unclear, misdiagnosis of MDS due to unrecognized B12 deficiency is increasingly reported. Studies suggest that up to 15% of hospitalized patients with unexplained cytopenias or macrocytosis are eventually diagnosed with MDS—yet some of these cases may represent treatable B12 deficiency.
The impact of misdiagnosis includes:
- Unnecessary emotional burden on patients
- Inappropriate use of therapies like hypomethylating agents
- Delayed treatment of a reversible condition that, if left unaddressed, can cause:
- Irreversible neurological damage
- Cognitive decline
- Depression
- Progressive hematologic complications
Critical Laboratory Findings That Differentiate the Conditions
Laboratory findings provide key differentiation points between pernicious anemia and MDS. Accurate interpretation requires understanding the limitations and strengths of various diagnostic approaches.
Serum B12 Assay Pitfalls: False Normal Results
Serum vitamin B12 levels are commonly ordered but can be misleading. In patients with pernicious anemia, the presence of anti-intrinsic factor antibodies can interfere with immunoassays, especially chemiluminescent platforms, leading to falsely normal or elevated values. Case reports illustrate how B12 levels may appear within the normal range (e.g., 490 pg/mL) while a secondary assay reveals severe deficiency (e.g., 79 pg/mL).
Up to 50% of patients with early or subclinical B12 deficiency may present with normal serum levels. Thus, clinicians should be cautious when interpreting B12 levels in isolation, especially in symptomatic individuals or those with hematologic abnormalities.
Methylmalonic Acid and Homocysteine as Superior Markers
Methylmalonic acid (MMA) and homocysteine levels offer greater sensitivity and specificity by measuring tissue-level activity of cobalamin. Both markers typically rise in B12 deficiency, even when serum levels appear adequate. When both are elevated, the sensitivity for detecting functional B12 deficiency reaches over 99%.
Clinical Considerations
- MMA may be falsely elevated in renal insufficiency but usually to a milder extent.
- Reference ranges vary across laboratories and should be age-adjusted.
- Homocysteine can also be elevated in folate deficiency, so interpretation should consider folate status.
These tests are essential in ambiguous cases and are particularly useful in elderly patients or those with confounding conditions.
Cytogenetic Abnormalities: Transient vs. Persistent
Vitamin B12 deficiency may cause chromosomal instability due to impaired DNA synthesis, leading to reversible cytogenetic changes. There are documented cases of temporary abnormalities—such as del(3p)—that resolved completely after B12 repletion.
In contrast, persistent or progressive cytogenetic findings, especially involving complex karyotypes, are more typical of true MDS. Repeat cytogenetic analysis after correcting B12 levels is essential in ambiguous presentations.
Bone Marrow Biopsy Interpretation Challenges
Bone marrow findings often overlap significantly between these conditions. Bone marrow in B12 deficiency can show:
- Megaloblastic changes
- Hypercellularity
- Dysplastic erythroid precursors
- Increased blasts (occasionally)
These features closely resemble those seen in MDS, making it difficult to distinguish between the two based on morphology alone. Further complicating diagnosis, markers such as CD163, commonly expressed in monocytic lineage, may overlap with chronic monocytic leukemia (CMML).
Follow-up marrow examination after B12 correction often shows complete resolution of dysplasia, helping confirm a nutritional rather than neoplastic etiology.
Molecular Mechanisms Behind Misleading Presentations
The molecular mechanisms of vitamin B12 deficiency creates room for misdiagnosis as myelodysplastic syndrome. At the cellular level, several key disruptions occur that manifest as hematological abnormalities strikingly similar to those seen in true malignancy.
DNA Synthesis Disruption in B12 Deficiency
The fundamental issue in B12 deficiency centers on impaired DNA synthesis. Vitamin B12 is a cofactor for methionine synthase, which catalyzes the conversion of 5-methyltetrahydrofolate to tetrahydrofolate (THF). In deficiency, this process stalls, creating the methylfolate trap, which inhibits thymidine synthesis and impairs DNA replication. This leads to:
- De novo thymidylate (dTMP) biosynthesis capacity decreases by 5-35%, while purine synthesis remains unaffected
- DNA double-strand breaks increase, as evidenced by elevated phosphorylated histone H2AX (γH2AX)
- Chromosomal abnormalities and DNA strand breaks occur due to genome instability
This trapped 5-methylTHF prevents formation of other folate coenzymes needed for DNA synthesis. Interestingly, the nucleus proves highly sensitive to 5-methylTHF accumulation, despite this compound being synthesized in the cytosol. This nuclear sensitivity creates distinct cellular abnormalities that mimic malignancy.
Cellular Morphology Changes: Why They Mimic Dysplasia
Vitamin B12 deficiency causes asynchrony between nuclear and cytoplasmic maturation in hematopoietic cells. This asynchrony manifests as:
- Giant metamyelocytes and bands in the bone marrow
- Hypersegmented neutrophils in peripheral blood
- Macrocytic red blood cells with aberrant nuclear development
During hematopoiesis, cells accumulate in S-phase since the G2-to-M transition cannot be completed without adequate THF pools. Consequently, the bone marrow becomes hypercellular with giant bands and proerythroblasts. In severe cases, these megaloblastic changes can be indistinguishable from MDS or even acute leukemia.
Unlike true MDS, these cytogenetic and morphological abnormalities completely resolve with vitamin B12 supplementation. This reversibility serves as a crucial differentiating factor between nutritional deficiency and malignant processes. Hence, in cases where MDS is suspected yet cytogenetic findings appear atypical, B12 deficiency should be conclusively ruled out through comprehensive testing before confirming an MDS diagnosis.
Difference Between B12 and Iron Deficiency in Hematologic Presentation
Proper differentiation between B12 and iron deficiency anemias offers valuable insights when evaluating potential MDS cases. Understanding their distinct hematologic signatures helps clinicians avoid misclassification and inappropriate treatment protocols.
Macrocytic vs. Microcytic Anemia Characteristics
B12 deficiency primarily results in macrocytic anemia with distinctly enlarged red blood cells (MCV ≥ 100 fL), whereas iron deficiency produces microcytic anemia with smaller than normal cells (MCV < 80 fL). B12-deficient RBCs appear oval-shaped rather than round, alongside characteristic macroovalocytes in peripheral blood. Importantly, concurrent B12 and iron deficiencies may yield normal MCV values, creating a misleading picture as the macrocytic effect of B12 deficiency can mask the microcytic effect of iron deficiency.
Reticulocyte counts remain low in both conditions, indicating ineffective erythropoiesis. Yet, iron-deficient cells typically display hypochromia (reduced hemoglobin concentration), a feature absent in B12 deficiency.
Neurological Manifestations: Present vs. Absent
The neurological presentation marks a fundamental distinction between these conditions:
- B12 deficiency frequently causes:
- Paresthesia (numbness, tingling)
- Gait instability
- Cognitive impairment, memory loss
- Visual disturbances
- Mood changes (e.g., depression, irritability)
Iron deficiency typically lacks these neurological symptoms. This distinction is pathophysiologically explained by B12’s essential role in myelin synthesis and stabilization. B12 functions as a crucial coenzyme for methionine synthesis and methylmalonyl-CoA conversion, processes vital for neuronal health. Accordingly, early diagnosis of B12 deficiency proves crucial, as prolonged deficiency leads to irreversible neurological damage even after hematologic parameters normalize with treatment.
Hypersegmented Neutrophils as a Diagnostic Clue
Hypersegmented neutrophils represent a valuable diagnostic marker, defined as neutrophils with six or more nuclear lobes or more than 3% of neutrophils with at least five lobes. This finding demonstrates remarkable sensitivity (91%) compared to elevated MCV (62%) or RDW (54%) in detecting B12 deficiency. Blood smear examination specifically looking for hypersegmentation is essential for screening B12 deficiency, as relying solely on automated parameters like MCV can miss many cases.
Occasionally, hypersegmentation appears in other conditions including uremia, certain medications, and surprisingly, even iron deficiency, but the pattern differs subtly from the characteristic findings in B12 deficiency.

Conclusion
Accurate differentiation between myelodysplastic syndrome and pernicious anemia remains crucial for optimal patient outcomes. Though these conditions share overlapping clinical presentations, several key distinctions emerge through careful analysis:
- Laboratory findings require thorough interpretation, particularly given the limitations of standard B12 assays
- Molecular mechanisms explain why B12 deficiency can mimic MDS at cellular levels
- Neurological manifestations serve as critical differentiating factors
- Reversibility of cytogenetic abnormalities after B12 supplementation indicates nutritional deficiency rather than true MDS
Maintaining high clinical suspicion and following a structured diagnostic approach can prevent unnecessary treatments for MDS and ensure timely correction of a fully reversible nutritional deficiency. In elderly patients, where both MDS and B12 deficiency are common, this distinction becomes even more important.
Frequently Asked Questions:
FAQs
Q1. How can pernicious anemia be mistaken for myelodysplastic syndrome (MDS)? Pernicious anemia can mimic MDS due to similar hematological findings, including cytopenias and dysplastic features in blood cells. Both conditions often present with fatigue and shortness of breath, especially in older adults, making initial clinical assessment challenging.
Q2. What are the key laboratory findings that differentiate pernicious anemia from MDS? While serum B12 tests can be misleading, elevated levels of methylmalonic acid (MMA) and homocysteine are highly sensitive markers for B12 deficiency. Additionally, cytogenetic abnormalities in pernicious anemia are typically transient and resolve with B12 supplementation, unlike in MDS.
Q3. Why can vitamin B12 deficiency cause cellular changes that resemble MDS? B12 deficiency disrupts DNA synthesis, leading to asynchrony between nuclear and cytoplasmic maturation in blood cells. This results in enlarged, abnormally nucleated cells that can be mistaken for the dysplastic cells seen in MDS.
Q4. How does the neurological presentation differ between B12 deficiency and iron deficiency anemia? B12 deficiency often causes neurological symptoms such as numbness, tingling in extremities, memory loss, and balance problems. These neurological manifestations are typically absent in iron deficiency anemia, providing a crucial differentiating factor.
Q5. What is the significance of hypersegmented neutrophils in diagnosing B12 deficiency? Hypersegmented neutrophils are a highly sensitive marker for B12 deficiency, with 91% sensitivity compared to other indicators. Their presence in a blood smear can be a valuable diagnostic clue, especially when other parameters like MCV may be misleading.